FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5068182
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGCCG1300.002524942615.92152761
TAGATCG3150.0087902968.76096565
TCGGAAG6753.6768784E-46.643731669
ATCGGAA7552.0559634E-46.39660168
GATCGGA7400.0011191336.06010167
AGATCGG7850.00226666665.71281966
Produced by FastQC (version 0.11.5)