FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4636982
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG6151.5903788E-78.97579568
GATCGGA6101.3581921E-68.4836969
ATCGGAA5958.861107E-68.11860366
CGGAAGA6402.3457527E-57.54703168
TCGGAAG6151.1707873E-47.293069467
TAGTAGC10705.676757E-45.158595630
Produced by FastQC (version 0.11.5)