FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4552118
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTTCG350.001348543139.4267589
AGATCGG6302.3028406E-78.7613169
TCGGAAG5552.87241E-47.45895269
GATCGGA6300.00122177196.57098269
ATCGGAA6050.0057811716.272300768
GACCTCG9300.00292677675.193138635
Produced by FastQC (version 0.11.5)