FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334265

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334265
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4552118
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1657.2793214E-414.63584669
TAGATCG2600.001800811210.61512668
AGATCGG7251.5778951E-57.13767969
GATCGGA6300.0087934626.02359767
CTACTCG10350.00202827785.00053827
Produced by FastQC (version 0.11.5)