FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334273

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334273
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5958716
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGT3150.008780118.76225362
GGATTCG3200.0099871368.62534265
AGCGTCG3850.004922148.06525561
ATCGGAA9505.014954E-97.626106369
GATCGGA9807.1306204E-87.040740568
AGATCGG11008.35098E-86.586016767
TGAGACG9400.0033445255.1380273
Produced by FastQC (version 0.11.5)