FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4901208
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCCGCG450.00461743330.6757850
GATCGGA6552.5437205E-46.84712768
TCGGAAG6200.0010187356.677222769
AGATCGG6804.018913E-46.59539469
ATCGGAA6650.00224683786.225380468
Produced by FastQC (version 0.11.5)