FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4633976
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTATT2000.003102033412.07417435
GATCGGA8554.8843503E-87.66630769
CGGAAGA8503.596142E-77.305855367
AGATCGG9654.0622763E-76.792647468
TCGGAAG8600.00109109045.616318766
ATCGGAA9708.5737073E-45.33508965
Produced by FastQC (version 0.11.5)