FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334301

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334301
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5431985
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAGTGC4750.00393536277.26345962
AGATCGG11001.5170372E-97.2136769
TCGGAAG9601.850063E-56.10962866
CGGAAGA10355.8479414E-55.66653767
ATCGGAA10002.1697806E-45.520229365
GATCGGA10554.6437784E-45.232540664
AAGAGCG10554.649829E-45.23205968
Produced by FastQC (version 0.11.5)