FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5061655
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC4100.0086612027.57239169
ACCTTCG5109.546066E-47.44276333
TCGGAAG8502.0613359E-56.49344968
GATCGGA8652.664102E-56.38090966
ATCGGAA8954.3849614E-56.166962667
CGGAAGA8752.1332968E-45.913676769
AGATCGG8700.0012649575.551207565
Produced by FastQC (version 0.11.5)