FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5061655
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG2509.341933E-512.41992966
CGTCGTG2801.9668068E-512.32087168
GCGTCGT2853.160543E-410.8944667
GTCGTGT4200.00117582718.21391569
AACCGAG4000.00681953747.77751731
ATCGGAA8804.8089205E-66.66460367
CGGAAGA9701.4040082E-45.69046469
GATCGGA8509.406874E-45.6823266
AGATCGG8950.00180681645.396670365
TCGGAAG8950.0018079415.39640468
AAGAGCG9500.00381523375.0839869
Produced by FastQC (version 0.11.5)