FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334306

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334306
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4841846
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGATAG1950.002565961312.38375158
AACGTCA3450.00182418149.00039452
GATCGGA7901.0558324E-77.860211468
ATCGGAA8352.6745147E-77.43660769
AGATCGG8352.114768E-67.02346267
TCGGAAG6950.00368288145.956419565
CGGAAGA8155.5049465E-45.92596765
Produced by FastQC (version 0.11.5)