FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334311

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334311
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5001977
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACGCCG1450.00522063914.27482444
AGATCGG9401.338804E-56.23915768
GATCGGA8853.718866E-56.237021469
TCGGAAG7650.00166488055.86255368
ATCGGAA9300.0029260215.193274567
Produced by FastQC (version 0.11.5)