FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4806980
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCCGA1100.00992718712.95364786-87
GATCGGG4058.033021E-89.38421394-95
ATCGGAA7400.08.98792294-95
AGATCGG8700.08.46280692-93
GATCGGA6353.274181E-108.22850492-93
TCGTAGG4004.8536155E-47.126137394-95
TACGGTT3550.0087233896.691208494-95
CTGTCGA4150.0055691686.295038768-69
TCGGAAG6601.18630334E-45.75768692-93
TCGGAAA7308.426299E-55.531704494-95
GTATGCC10254.1456096E-65.09837594-95
Produced by FastQC (version 0.11.5)