FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4629776
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG8500.010.63129294-95
GATCGGA6850.09.02618394-95
TAGATCG3904.5161905E-68.53659894-95
AAGATCG5651.5792175E-67.15520194-95
TCGGAAG9153.274181E-117.017203394-95
ATCGGAA9752.1827873E-116.82927994-95
TCGATTT5900.0063952075.232419546-47
CGGAAGA9201.7686802E-55.169678794-95
Produced by FastQC (version 0.11.5)