FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334328

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334328
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4328970
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGGGC3258.035941E-411.6910177
TAGATCG3101.5976184E-811.5078894-95
AGATCGG8750.010.05679194-95
GATCGGA7850.08.48309194-95
ATCGGAA9007.888957E-96.342120694-95
GCCACCG14652.1891428E-66.15972955
CGGAAGA9551.7477578E-75.72783294-95
CCACCGC14507.620309E-55.56835036
AAGATCG6708.8073465E-45.324541694-95
TCGGAAG8502.6247948E-55.316189394-95
Produced by FastQC (version 0.11.5)