FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334331

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334331
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4624613
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTACGG2401.825218E-49.89793794-95
GATCGGG3550.0087188696.69156294-95
CGAATCC3550.0087188696.69156294-95
AGATCGG6602.6230919E-66.478649694-95
ATAGGGG15605.9117156E-105.02510694-95
Produced by FastQC (version 0.11.5)