FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4493590
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA4757.706869E-67.51043394-95
AGATCGG6057.738345E-87.469053794-95
TCGGAAG5902.2777605E-56.449637494-95
ATCGGAA6253.4535266E-45.70792994-95
Produced by FastQC (version 0.11.5)