FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334339

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334339
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4493590
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGCC1154.2690237E-516.52495294-95
TACGTCC2800.0080442267.635412794-95
ATAACGG3150.00272777757.54114894-95
AGATCGG7151.4407015E-66.31241694-95
GATCGGA5658.858781E-56.30537792-93
AAGCCGG5650.00382968555.465664494-95
ATCGGAA7456.6404213E-45.101662694-95
Produced by FastQC (version 0.11.5)