FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5070152
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG8500.09.23309294-95
GGTTCCG3350.00498558677.08922554-55
TAGATCG3600.0099955626.597340692-93
CGAGATT5051.4129003E-46.58411432-33
GATCGGA7659.868927E-86.528449594-95
TCGGAAG8551.23473E-76.119398694-95
CAGATCG4900.00472933855.824214594-95
ATCGGAA8554.911457E-65.5630994-95
Produced by FastQC (version 0.11.5)