FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334343

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334343
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4941212
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG9800.08.96816494-95
GATCGGG4151.0559097E-58.01323494-95
ATCGGAA8650.07.96360794-95
GATCGGA7601.2321834E-86.876018594-95
TGATCGG4050.0043112656.45157294-95
ATCACGG7201.0811435E-55.938379394-95
AAGATCG6250.00216421425.31992692-93
Produced by FastQC (version 0.11.5)