FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4500131
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGG3356.2306E-58.50846694-95
AGATCGG7601.6334525E-97.188348394-95
GGACGCC5651.6084923E-67.14686194-95
GTGCGTT3700.00166792557.061643694-95
ATCGGAA7253.6474376E-86.879128592-93
ACGAGGG5352.981009E-46.215686394-95
GATCGGA5751.1283644E-46.19548892-93
TCGGAAG6601.18704265E-45.75742392-93
AGGCGTT6404.8416536E-45.56706394-95
CGGGCTT6708.95822E-45.317791594-95
Produced by FastQC (version 0.11.5)