FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4187652
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG3052.039898E-59.3559494-95
AGATCGG6352.28938E-87.489662694-95
GATCGGA6402.7064743E-87.42205492-93
TCGGAAG6907.668641E-76.548028594-95
CGGAAGA6905.3279364E-66.203395494-95
ATCGGAA8355.1309144E-75.98051994-95
Produced by FastQC (version 0.11.5)