FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334357

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334357
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4187652
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGG3802.6930752E-47.500995694-95
GATCGGA6057.930066E-87.45864392-93
CGAGCTT3300.00429932547.197924694-95
ATCGGAA6757.184826E-87.037970594-95
AGATCGG7506.9359885E-86.650882794-95
ACGGCTT4600.00236789866.19647494-95
CGCCATT5550.00310288115.56380294-95
AAGTACC14951.8189894E-105.243170794-95
TCGGAAG6500.00353468845.115360792-93
GCAAACC15504.947651E-105.057122794-95
Produced by FastQC (version 0.11.5)