FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4576468
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG2654.500419E-59.8705294-95
AGATCGG6850.09.71987494-95
GATCGGA6103.7197504E-56.23710994-95
AAGATCG5350.00198044335.7780794-95
GAGATCG8157.685392E-55.25179994-95
Produced by FastQC (version 0.11.5)