FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4576468
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCAACCG2050.006199076313.9096673
AGATCGG7350.010.018435594-95
GATCGGG3406.785258E-47.684919494-95
CGTAAGG3650.00144383717.15855694-95
TCGGAAA8157.8170364E-55.246147694-95
TCGGAAG6400.00291281265.19528792-93
ATCGGAA6550.00388166735.0770694-95
Produced by FastQC (version 0.11.5)