FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334364

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334364
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4462638
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCG3305.1556774E-58.64717894-95
AGATCGG7002.3119355E-97.473632394-95
GATCGGA6451.7682487E-66.636205794-95
ATCGGAA8351.1299562E-86.55010894-95
TCGGAAG7359.188423E-55.500075394-95
Produced by FastQC (version 0.11.5)