FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5310802
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTT3700.00166699837.06204394-95
ATCGGAA7302.0567804E-66.182585794-95
ACGGCTT4650.00267193866.130101794-95
GATCGGA5550.00310765285.56311792-93
GCACGTT6500.00352711865.11627794-95
Produced by FastQC (version 0.11.5)