FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5017353
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGG3900.012.79093594-95
AGATCGG12050.08.08247694-95
GATCGGA9601.8189894E-127.1746592-93
GAGCGTT4055.592759E-47.03839894-95
ATCGGAA10800.06.81844894-95
CAACGTT3850.00253443076.78702694-95
AGAGCGG8552.6902853E-96.66795694-95
GAGATCG9509.773794E-75.500131692-93
TCGGAAG10857.208655E-85.472481392-93
TCGGAAA8301.8007351E-55.43779894-95
GTTATCC11757.216295E-85.256335394-95
Produced by FastQC (version 0.11.5)