FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4913222
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCC2550.00347220648.38371794-95
AGATCGG7653.6379788E-128.07320894-95
GATCGGA5001.988792E-67.600075292-93
GATCGGG3903.6302963E-47.30888194-95
ATCGGAA7152.0508742E-76.644437394-95
GAATCGG5100.0074617825.58914494-95
GGCCGTT5200.00924055.481660494-95
GATTGCC12303.6512574E-85.214262594-95
Produced by FastQC (version 0.11.5)