FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334381

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334381
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4674732
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGCAA3601.5475758E-58.57759594-95
GGCCGTT4157.3920615E-46.868435494-95
CATTCGG4951.0863347E-46.71811694-95
CTCGTTT6257.799925E-66.46090894-95
AGATCGG6509.502075E-55.84697694-95
ATCGGAA5950.00116109745.589020794-95
TCGGAAA6850.00120341815.20146194-95
Produced by FastQC (version 0.11.5)