FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5177268
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCGG6403.8198777E-108.16584294-95
ATCGGAA7652.401066E-107.452604394-95
ACGGTCC4350.0090494846.00705694-95
GATCGGA5150.00127332935.99546792-93
ACGTTCC7159.649728E-65.980324394-95
CATTCGG5750.00470831345.370735694-95
CCACCGG7551.398354E-45.34884894-95
TCGGAAA8208.598571E-55.214551494-95
TGCACGG6050.0085415.10441894-95
Produced by FastQC (version 0.11.5)