FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334387

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334387
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4983803
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGAATT3050.00198861477.787955894-95
AGATCGG5407.862036E-77.477879594-95
TTTCGGG3750.00192174136.96762494-95
Produced by FastQC (version 0.11.5)