FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4429821
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTTCGG4159.142237E-57.44063294-95
ATCGGAA6109.145333E-87.398409494-95
AGATCGG7102.4383553E-87.02547294-95
GACGTCC3600.0099857066.597996794-95
TTACCGC4000.00379390626.53094786-87
GATCGGA5008.9319114E-46.17485392-93
CACGCAA4250.00712104936.147780494-95
GTATGCC8801.3893332E-65.66827994-95
TCGGAAG6000.00129359125.541534492-93
CCCGGCT11400.00423647845.4189242
Produced by FastQC (version 0.11.5)