FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4225678
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA5650.010.51052294-95
CGTGCAA2502.7536848E-49.50151294-95
AGATCGG6701.8189894E-128.8618392-93
CGACTTT3802.6922656E-47.501193594-95
GATCGGA4757.860919E-67.49990692-93
GCGGGTT3853.129709E-47.40377594-95
GGACCGG4251.2264964E-47.265861594-95
TTGACGG3750.00192121656.96777594-95
CCACCGG6300.00238650925.27861894-95
TTCAACC21850.05.000795494-95
Produced by FastQC (version 0.11.5)