FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4455346
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGG4801.8189894E-1210.88719694-95
ATCGGAA6709.731593E-107.79978294-95
AGATCGG8151.2551027E-107.28646794-95
GATCGGA5500.0027863185.614554494-95
CGTGTGG7803.8986982E-55.48166594-95
Produced by FastQC (version 0.11.5)