FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3856524
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGG4055.820766E-1111.14365494-95
AGATCGG5501.6043487E-98.63766694-95
GACTCCG6000.00168814287.9183732
CGCAGAA4502.4770084E-46.86214594-95
TCGTCTT6100.00159049865.451641694-95
AGGACGG7204.1033386E-45.27857394-95
Produced by FastQC (version 0.11.5)