Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005334417 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5150347 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCCGTA | 95 | 3.0694506E-4 | 21.787558 | 46 |
GCCGTAT | 215 | 0.0053250208 | 11.23157 | 47 |
CCGTATC | 285 | 0.0038587744 | 9.683358 | 48 |
CGTGATT | 515 | 1.21027755E-4 | 8.037425 | 38 |
ATCGGAA | 1065 | 3.2440767E-7 | 6.4780517 | 68 |
TCGGAAG | 1070 | 3.5299308E-7 | 6.447843 | 69 |
GATCGGA | 1045 | 1.6075519E-6 | 6.2719927 | 67 |
AGATCGG | 1120 | 5.2358027E-6 | 5.851993 | 66 |
CGGAAGA | 1070 | 5.68229E-4 | 5.1582747 | 69 |