FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5896540
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACCGT1900.002111465712.70962422
TAGATCG3900.00551355357.96408168
AGATCGG8302.8723662E-87.900044469
GATCGGA7500.0085270585.521762468
Produced by FastQC (version 0.11.5)