FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5631532
Sequences flagged as poor quality0
Sequence length75
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGTTA2950.00511422059.3583454
GCGTCGT4401.9582929E-48.62538566
CGTCGTG4552.8137697E-48.34103267
AGCGTCG5150.00106109457.369195565
TCGTGTA5750.0033987326.59982669
GTCGTGT5900.0044491476.432033568
TCGGAAG12808.533032E-65.390482469
GATCGGA13856.056118E-65.23090969
AGATCGG14209.525085E-65.10197868
CGGAAGA12251.3381573E-45.069614467
Produced by FastQC (version 0.11.5)