FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005334430

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005334430
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4872017
Sequences flagged as poor quality0
Sequence length75
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGCGC1500.00653112313.80054656
TAGATCG2800.00332926969.85773569
CGATATT3750.00387512528.28219851
GATCGGA6059.5679185E-57.413135567
TCGGAAG6250.00111475376.62439869
ATCGGAA6350.00133420526.520076868
AGATCGG6350.00133528966.519608566
Produced by FastQC (version 0.11.5)