FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005344098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005344098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2447258
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTGTCG11100.036.965488
GTCTCGC12000.031.9964681
TTATGCG1255.375465E-428.7941674
GGCGTAC1804.079644E-628.7147751
TCGCTCT13450.028.3659974
CGATACT1050.00798329427.4230164
GTCTTGC22750.026.93871
TCTCGCT13950.026.853572
CTGTCGC15600.025.8409189
GTGTTAG16900.025.3408531
CTCGCTC14600.025.145593
GTATAAT7350.025.1149651
GGTATAC5100.024.6126671
GTGTAAC7500.024.6126671
GTGTTAC10200.023.1648641
GTCTCAC31000.023.1041471
GTGTTAT8950.023.1001571
GTATAGA7700.023.014441
GTATAAG6200.022.6277731
CGCTCTG14150.022.3841555
Produced by FastQC (version 0.11.5)