FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005344159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005344159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3792814
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATATCG1953.092282E-1123.33303570
TCTCGTA8000.021.87472270
GTACGAC900.00527301519.4482981
GTATCGC1301.056845E-418.8498881
TCTGTCG8650.018.207868
GTATAGG4900.017.8606821
GTCTCGC10650.017.7499941
GTCTTGC21850.017.4634131
GTATAAG6700.017.2422221
TATCTCG16250.017.01516770
GTATAAA8600.016.2822951
ATCTCGT13550.016.27285470
GTATAGA6050.016.2015551
GTATTAC7100.015.7777751
CTATATG8450.015.73944570
CACGAGC9600.015.67688370
GTATTAT6300.015.5586381
TCTATAT52150.015.30181770
GTATTGG7550.015.3010451
CTGTCGC11750.015.1912959
Produced by FastQC (version 0.11.5)