FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005344245

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005344245
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3032771
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGTA7250.025.58567870
ATCTCGT13000.023.9610470
GTCTTGC18200.021.5415651
GTCTCGC8300.021.5091271
TCTGTCG7800.021.0896558
TCGCTCT8850.020.1727334
GTGTACG2101.9645086E-920.0028821
GTATAGG4400.019.8892291
CGCGTCA900.00527945319.4440426
GTATAAG6000.018.6693571
TGTCGCC9600.018.59336510
AATCTCG23400.018.54662370
GTATTAC5150.018.352161
CTGTCGC9900.018.0302269
GTATAAT5500.017.8207511
TTACACT8950.017.6005924
TACCCGT1000.00968496417.5028136
TCGCCCA9550.017.2250612
GTATTAG5950.017.0612831
TAGTACT3700.017.0297624
Produced by FastQC (version 0.11.5)