FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005344263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005344263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3026412
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCTCGT16550.027.70336370
TCTCGTA8950.026.20058670
TCTGTCG8750.023.9995128
GTCTTGC17450.021.8674411
TATCTCG21350.021.14711269
CTATATG7350.020.95195670
CTGTCGC10400.020.5284299
GTCGCCC9850.019.89807311
TGTCGCC10750.019.20891410
GTCTCGC9250.018.9232251
GTATAGG4450.018.8807011
GTATAAT5100.018.5336281
TCGCTCT9450.018.5224254
TATATCG2005.15849E-717.49964570
GTATATA6700.017.2427271
CTATATA5950.017.05847770
ATAACGG1452.4370462E-416.9001183
CTCGTAT5200.016.82658270
GTGTATA9200.016.742941
CTTGTCG1704.3904514E-516.4702539
Produced by FastQC (version 0.11.5)