FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005344303

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005344303
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3097801
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGTA9650.028.65228870
TCTGTCG8350.028.5024368
TGTCGCC9300.026.3435710
ATCTCGT16100.025.86905970
GTATTAA6500.024.7731441
CTGTCGC10050.024.7258839
GTCTCGC9450.023.7074491
GTATAAT6500.022.6189581
GTCGCCC9950.022.51248611
TCGCTCT11000.021.6390824
TCGCCCA11050.021.53838712
GTCTTGC17650.021.2214811
TATTCCG1356.023538E-620.7433475
GTACGTA850.003788726220.5914881
TATCTCG21750.019.30996770
AACCGTC1451.1183596E-519.3099657
GGATATG11700.019.14492470
GTGTAAC5700.019.0380951
TAATACT5550.018.9212974
CTCGCTC11450.018.0372033
Produced by FastQC (version 0.11.5)