FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005344355

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005344355
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3858102
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTGTCG10550.024.880838
GTATTCG1652.6575435E-923.3399491
TCGCTCT11250.021.7808464
GTATTAT6600.021.7485891
GTATTAG8450.021.544571
CTGTCGC13000.021.5384259
GTCTCGC12400.021.4576951
TGTCGCC13600.020.58820210
TAATACT7050.020.357484
TATTACG1055.464575E-420.002822
GTCGCCC13100.019.50378411
GTCTTGC26500.019.42061
GTATAGG6000.019.2554571
GGTCGAC1107.4828777E-419.0903847
GTATACG1852.2686436E-718.9242841
GTATTAA7750.018.521381
TCGCCCA14400.018.4721912
CTCGCTC12750.018.3947493
GTATATA8950.017.9939271
GTATAAG6050.017.9389691
Produced by FastQC (version 0.11.5)