FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005344770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005344770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2897610
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCGTAC1609.731593E-1040.9440041
GTCTCGC14600.031.9076541
TCGCTCT14050.031.7686084
TCTGTCG13600.031.7610688
GTCTTGC25200.031.195431
GGTATAC6000.029.1157361
TAATACT6550.025.2795494
CTGTCGC17700.025.2174539
CGCTCTG16200.024.8860425
GGCTAGA17750.024.6048451
TCGCACT3251.6152626E-924.3664424
TTGCTCT35250.024.3036044
CTCGCTC17800.024.2668843
GTATAGT7550.024.102431
TCTCGCT17450.023.5549532
TAGTACT7100.023.3212764
GTATAAG8850.023.0293961
GTGCTAC10150.022.9483621
ACCGTGT11150.022.5983098
GTGTTAC11700.022.3967191
Produced by FastQC (version 0.11.5)