FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005344941

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005344941
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2629790
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAACCG605.1320164E-447.9739045
TCTGTCG12000.045.5752038
GTCTCGC11800.042.7097551
TCGCTCT13600.040.7425424
TCTCGCT13900.035.7324452
CTGTCGC15250.035.3905839
CTCGCTC14850.034.9007263
CGCTCTG15750.034.2670755
GTCTTGC25350.033.2291261
GTATTAC5600.026.9986651
GTCTTAC11700.025.8448771
GTGTTAC11500.025.042241
TTGCTCT33900.024.8360464
GTATTAG10250.024.5841521
CTTGCTC32550.023.662533
GTGCTAC9150.023.605391
GGGTTTC45500.022.7856861
TAATACT7900.022.7724194
GTATTAA8950.022.5240271
GTCTCAC31850.022.3788011
Produced by FastQC (version 0.11.5)