Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005345375 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1373662 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTGTCG | 360 | 0.0 | 29.164602 | 8 |
GTATTAG | 225 | 0.0 | 26.448349 | 1 |
CTGTCGC | 445 | 0.0 | 25.954165 | 9 |
ATTAGAC | 215 | 5.456968E-12 | 22.794064 | 3 |
GTCTTGC | 895 | 0.0 | 22.293797 | 1 |
TGTCGCC | 475 | 0.0 | 22.104506 | 10 |
GTATTAC | 260 | 0.0 | 21.541643 | 1 |
GTATAAT | 230 | 1.2732926E-11 | 21.307495 | 1 |
TAACCCG | 120 | 5.7122365E-5 | 20.419682 | 5 |
GGTATAC | 155 | 8.739389E-7 | 20.325583 | 1 |
GGTCCGC | 125 | 7.8189E-5 | 19.602896 | 1 |
TATACTG | 305 | 0.0 | 19.511078 | 5 |
GTGTTAG | 485 | 0.0 | 19.487415 | 1 |
GTCTCAC | 970 | 0.0 | 19.126537 | 1 |
TTTCGAA | 110 | 7.4816943E-4 | 19.08956 | 17 |
GTGTAGG | 410 | 0.0 | 18.783262 | 1 |
GTATAGA | 225 | 4.622052E-9 | 18.669422 | 1 |
GTATAAG | 225 | 4.622052E-9 | 18.669422 | 1 |
GTGTAGA | 425 | 0.0 | 18.120323 | 1 |
GTCGCCC | 465 | 0.0 | 18.063896 | 11 |