FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005345450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005345450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2220502
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGTTT657.9610694E-426.92343320
GTCTCGC5200.022.2123341
TCTGTCG5600.021.250288
CTATGCG1205.720189E-520.4169359
GTCTTAC6700.019.8514561
TCGCTCT7250.018.3450684
GTATAAA6150.017.6429061
CTGTCGC6500.017.2309979
GTCTAGC6950.017.1229131
GTCGCCC6350.017.08683811
GTGTAAG6400.016.953731
GTATTAA4750.016.9479731
GTGTAAC4350.016.8971561
AATACCG1250.00176313616.8002225
CGCTCTG7750.016.7098985
GTGTAGG6300.016.6672611
CTCGCTC7000.016.5002173
TAGTACT2552.1789674E-816.4708064
TCTCGCT7050.015.8867352
GTCTCAC16750.015.8811641
Produced by FastQC (version 0.11.5)